Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830917.1_cds_XP_016504324.1_17780
CDS Infomation

[gene=LOC107822305] [db_xref=GeneID:107822305] [protein=IRK-interacting protein-like] [protein_id=XP_016504324.1] [location=19217..20659] [gbkey=CDS]
Sequence

ATGGCCAACAAGGTCTCCAATTTCTCCGATCTAATCCAACGTGTCACTGCTTCTTGCTTG
CTTCATCCACTTTCCTCTGGCCGTATTGACGGCAATATCTCCGATGCTCGTTATAGCGAT
GAATCTGAAGATGACAAGTACAGTACCGAAGACGAAGAAGAAAAAGAAGACCCACCTTAT
GTGGAGACTCGGGAAAAATTCCAGAATGTTGAGGTCACAAAGGAGGAGATAAGAACTGAG
AAAGTAACTGAAATGGAGATGCTTTTAGGGGAAGTTTTTGACGCGGTGTCGGCAGTGAAG
ACGGCTTACGTTAGTCTACAGGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGTGTG
GCTGACGTGGCTGTGATATCTGAACTGCGGAGGCTTGGGGTGTTGAGGGAACGATTTCGA
AGGAATGTTGGTGGTGGAATTAGAAAAGGGGACTGGAGAGTTGGCGCCGCTACGCTGAGA
GAAGTGGTGGCACCATATGAAGCCACCGTGGAGGAACTGAGGCAAGAAGTGAAGGCCAAA
GAAATCGAGATTGATAATTTGAGGGAGAAGCTGAAAACAGCAACAAGTCTTAGCAGCAGT
GGTGGAAAGAAAAGCAAGTCAAAACGAAAAGTTAGCGGTAGCAGTCAAGCTCCAGTTACA
ATGTCGCCGGCACCTGACGTATTCGAAACTACAGTGAGCTTAGTAAAAGAAGCTTCAAAA
TCCTTCACGAGTTTGCTCCTCTCTTTGATGCGCTCTGCTCACTGGGACATTGCAGCGGCG
GTGAGATCCATCGAAGCTGCTTCATCCAACACAAACACACCCACGGCAGATTCTATCGTT
GGAGCCAACCATGCCAAATACGCACTGGAATCTTATGTGAACCGCAAAATGTTCCAAGGA
TTCGATCACGAGACGTTCTACATGGATGGAAGCTTATCATCACTAATCCACCCAGATCAA
CACCGGCGCGATTGTTTTACACAGTACAGGGACATGAAAGCAATGGACCCAATGGAACTT
CTGGGAATTCTCCCCACTTGCAGTTTCGGGAACTTCTGTTTCAAGAAGTATTTGGCCATT
GTGCACCCAAAAATGGAGGAGTCTCTGTTTGGTGATTTGGAGCAGCGGCGACAGGTGTTG
GCTGGGAACCATCCGAGGAGTCAGTTTTATGGGGAGTTTCTTGGGCTAGCAAAGGCCGTT
TGGCTGCTGCATTTGCTAACCTTTTCTTTGGATCCTCCGCCAAGTCATTTCGAGGCGAGC
AAAGGATCTGAGTTTCACCCGCAGTACATGGAAAGTGTGGTGAAGTATTCCATTTCCATG
GGCATAGGAGGGAGAATGGGTATGGGTCTAGTTGTCGGATTTCCAGTTAGTCCCGGGTTT
AAGCTTGGAAATGGATCGGTTGTTAAGGCTAGAGTTTATTTAGTCCCCAAAAATGGGTTT
TAA

Peptide Sequence

PEP ID

XP_016504324.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MANKVSNFSDLIQRVTASCLLHPLSSGRIDGNISDARYSDESEDDKYSTEDEEEKEDPPY
VETREKFQNVEVTKEEIRTEKVTEMEMLLGEVFDAVSAVKTAYVSLQEAHCPWDQDKMRV
ADVAVISELRRLGVLRERFRRNVGGGIRKGDWRVGAATLREVVAPYEATVEELRQEVKAK
EIEIDNLREKLKTATSLSSSGGKKSKSKRKVSGSSQAPVTMSPAPDVFETTVSLVKEASK
SFTSLLLSLMRSAHWDIAAAVRSIEAASSNTNTPTADSIVGANHAKYALESYVNRKMFQG
FDHETFYMDGSLSSLIHPDQHRRDCFTQYRDMKAMDPMELLGILPTCSFGNFCFKKYLAI
VHPKMEESLFGDLEQRRQVLAGNHPRSQFYGEFLGLAKAVWLLHLLTFSLDPPPSHFEAS
KGSEFHPQYMESVVKYSISMGIGGRMGMGLVVGFPVSPGFKLGNGSVVKARVYLVPKNGF

Transcript Sequence

Gene sequence data has not been registered.